Welcome to Neuroslice
Neuroslice is a Python package for brain tumor segmentation using the YOLOv11m model on MRI FLAIR data.
Overview
Neuroslice provides automated brain tumor bounding box detection using pre-trained YOLO models. It processes FLAIR MRI images slice-wise and supports three slice orientations (coronal, sagittal, and axial). Models are automatically downloaded from Hugging Face when first used.
Quick Start
Install via pip:
pip install neuroslice
Basic usage:
neuroslice input.nii.gz output_mask.nii.gz --axis 0 --mode --verbose
Warning
Only use FLAIR sequences as the model was trained only on FLAIR data.
Table of contents
Installation
Usage Guide
Additional Information